Data

Coal Seam Formation Water Community Profiles

Commonwealth Scientific and Industrial Research Organisation
Greenfield, Paul ; Midgley, David ; Tran-Dinh, Nai
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.4225/08/5b31ca6373d48&rft.title=Coal Seam Formation Water Community Profiles&rft.identifier=https://doi.org/10.4225/08/5b31ca6373d48&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=This collection includes data to support the paper on the Kelpie software which reconstructs amplicons from metagenomes. Specifically, the collection includes three zip files which includes pair-merged amplicon data for the 3 samples; the corresponding 16S-filtered WGS data and the original metagenomes.The three formation water samples in the data labelled as:W1, W2, W3 – and their respective basins/CSMB refs are in the Kelpie manuscript.Lineage: All data was generated from by extracting DNA from coal seam formation waters from samples W1, W2 or W3. DNA was then subject to (a) 16S PCR amplifications and Illumina sequencing of the amplicon pool or (b) metagenomic sequencing.&rft.creator=Greenfield, Paul &rft.creator=Midgley, David &rft.creator=Tran-Dinh, Nai &rft.date=2018&rft.edition=v1&rft_rights=Creative Commons Attribution 4.0 International Licence https://creativecommons.org/licenses/by/4.0/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2018.&rft_subject=genomics metagenomics coal microbiome&rft_subject=Microbial ecology&rft_subject=Microbiology&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Applications in life sciences&rft_subject=Applied computing&rft_subject=INFORMATION AND COMPUTING SCIENCES&rft.type=dataset&rft.language=English Access the data
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Creative Commons Attribution 4.0 International Licence
https://creativecommons.org/licenses/by/4.0/

Data is accessible online and may be reused in accordance with licence conditions

All Rights (including copyright) CSIRO 2018.

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This collection includes data to support the paper on the Kelpie software which reconstructs amplicons from metagenomes.

Specifically, the collection includes three zip files which includes pair-merged amplicon data for the 3 samples; the corresponding 16S-filtered WGS data and the original metagenomes.

The three formation water samples in the data labelled as:
W1, W2, W3 – and their respective basins/CSMB refs are in the Kelpie manuscript.
Lineage: All data was generated from by extracting DNA from coal seam formation waters from samples W1, W2 or W3. DNA was then subject to (a) 16S PCR amplifications and Illumina sequencing of the amplicon pool or (b) metagenomic sequencing.

Available: 2018-06-26

Data time period: 2018-01-01 to 2018-01-01

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Applications in Life Sciences | Applied Computing | Biological Sciences | Information and Computing Sciences | Microbial Ecology | Microbiology | genomics metagenomics coal microbiome |

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