Dataset

Campylobacter concisus UNSWCD Genome

University of New South Wales
The NSW Systems Biology Initiative (Owned by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://nexus.systemsbiology.org.au/experiments/2/input_collections/5&rft.title=Campylobacter concisus UNSWCD Genome&rft.identifier=http://nexus.systemsbiology.org.au/experiments/2/input_collections/5&rft.publisher=University of New South Wales&rft.description= Campylobacter concisus is an emerging pathogen of the human gastrointestinal tract. Its role in different diseases remains a subject of debate; this may be due to strain to strain genetic variation. Here, we sequence and analyze the genome of a C. concisus from a biopsy of a child with Crohn's disease (UNSWCD); the second such genome for this species. A 1.8 Mb genome was assembled with paired-end reads from a next-generation sequencer. More Information: Deshpande NP, Kaakoush NO, Mitchell H, Janitz K, Raftery MJ, et al. (2011) Sequencing and Validation of the Genome of a Campylobacter concisus Reveals Intra-Species Diversity. PLoS ONE 6(7): e22170. DOI: 10.1371/journal.pone.0022170 &rft.creator=The NSW Systems Biology Initiative&rft.date=2013&rft_rights=For more details please visit: http://www.ncbi.nlm.nih.gov/About/disclaimer.html Databases of molecular data on the NCBI Web site include such examples as nucleotide sequences (GenBank), protein sequences, macromolecular structures, molecular variation, gene expression, and mapping data. They are designed to provide and encourage access within the scientific community to sources of current and comprehensive information. Therefore, NCBI itself places no restrictions on the use or distribution of the data contained therein. Nor do we accept data when the submitter has requested restrictions on reuse or redistribution. However, some submitters of the original data (or the country of origin of such data) may claim patent, copyright, or other intellectual property rights in all or a portion of the data (that has been submitted). NCBI is not in a position to assess the validity of such claims and since there is no transfer or rights from submitters to NCBI, NCBI has no rights to transfer to a third party. Therefore, NCBI cannot provide comment or unrestricted permission concerning the use, copying, or distribution of the information contained in the molecular databases.&rft_subject=Genomics&rft_subject=BIOLOGICAL SCIENCES&rft_subject=GENETICS&rft.type=dataset&rft.language=English Access the data

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For more details please visit: http://www.ncbi.nlm.nih.gov/About/disclaimer.html
Databases of molecular data on the NCBI Web site include such examples as nucleotide sequences (GenBank), protein sequences, macromolecular structures, molecular variation, gene expression, and mapping data. They are designed to provide and encourage access within the scientific community to sources of current and comprehensive information. Therefore, NCBI itself places no restrictions on the use or distribution of the data contained therein. Nor do we accept data when the submitter has requested restrictions on reuse or redistribution. However, some submitters of the original data (or the country of origin of such data) may claim patent, copyright, or other intellectual property rights in all or a portion of the data (that has been submitted). NCBI is not in a position to assess the validity of such claims and since there is no transfer or rights from submitters to NCBI, NCBI has no rights to transfer to a third party. Therefore, NCBI cannot provide comment or unrestricted permission concerning the use, copying, or distribution of the information contained in the molecular databases.

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Brief description

Campylobacter concisus is an emerging pathogen of the human gastrointestinal tract. Its role in different diseases remains a subject of debate; this may be due to strain to strain genetic variation. Here, we sequence and analyze the genome of a C. concisus from a biopsy of a child with Crohn's disease (UNSWCD); the second such genome for this species. A 1.8 Mb genome was assembled with paired-end reads from a next-generation sequencer.

More Information:

Deshpande NP, Kaakoush NO, Mitchell H, Janitz K, Raftery MJ, et al. (2011) Sequencing and Validation of the Genome of a Campylobacter concisus Reveals Intra-Species Diversity. PLoS ONE 6(7): e22170.

DOI: 10.1371/journal.pone.0022170

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