Data

Biological and environmental data for Di Cairano et al 2026

Macquarie University
Grant Hose (Aggregated by) Kathryn Korbel (Aggregated by) Maria Di Cairano (Aggregated by)
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25949/30997723.v1&rft.title=Biological and environmental data for Di Cairano et al 2026&rft.identifier=10.25949/30997723.v1&rft.publisher=Macquarie University&rft.description=Samples of groundwater were collected from Bellevue Farm adjacent to the Namoi River in 2017-2018. Samples were analysed to characterise the water quality, prokaryote and eukaryote communities in the water. Water quality data were also collected. Biological assemblage data derived from Illumina sequencing of 16S rDNA and 18S rDNA amplicons. Sequence data were processed using Greenfield Hybrid Analysis Pipeline (GHAP) v2.2, created by CSIRO Australia (available at https://cloudstor.aarnet.edu.au/plus/s/ pUvwME6fMeCcX - zL). Taxonomic assignment is based on the Ribosomal Database Project (RDP) Classifier (Wang, Garrity et al. 2007). OTUs were assigned using a 97% similarity threshold). Low abundant OTUs (&rft.creator=Grant Hose&rft.creator=Kathryn Korbel&rft.creator=Maria Di Cairano&rft.date=2026&rft_rights= https://creativecommons.org/licenses/by/4.0/&rft_subject=Ecosystem function&rft_subject=Environmental assessment and monitoring&rft_subject=Community ecology (excl. invasive species ecology)&rft_subject=Namoi River&rft_subject=Groundwater&rft_subject=eDNA&rft_subject=Prokaryota&rft_subject=Eukaryota&rft.type=dataset&rft.language=English Access the data
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Samples of groundwater were collected from Bellevue Farm adjacent to the Namoi River in 2017-2018. Samples were analysed to characterise the water quality, prokaryote and eukaryote communities in the water. Water quality data were also collected. Biological assemblage data derived from Illumina sequencing of 16S rDNA and 18S rDNA amplicons. Sequence data were processed using Greenfield Hybrid Analysis Pipeline (GHAP) v2.2, created by CSIRO Australia (available at https://cloudstor.aarnet.edu.au/plus/s/ pUvwME6fMeCcX - zL). Taxonomic assignment is based on the Ribosomal Database Project (RDP) Classifier (Wang, Garrity et al. 2007). OTUs were assigned using a 97% similarity threshold). Low abundant OTUs (<10), organelles and unassigned taxa at kingdom level were removed.

Issued: 15 01 2026

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Subjects
Community ecology (excl. invasive species ecology) | Ecosystem function | Environmental assessment and monitoring | Eukaryota | Groundwater | Namoi River | Prokaryota | eDNA |

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url : https://dataportal.arc.gov.au/NCGP/Web/Grant/Grant/LP190100927

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