Data

Bioinformatic Pipeline Scripts Amplicon Sequencing - Grey Box Grassy Woodlands

Flinders University
Fickling, Nicole
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.25451/flinders.29848280.v1&rft.title=Bioinformatic Pipeline Scripts Amplicon Sequencing - Grey Box Grassy Woodlands&rft.identifier=10.25451/flinders.29848280.v1&rft.publisher=Flinders University&rft.description=Bioinformatic scripts for the paper titled Habitat fragmentation shifts soil microbial composition but not richness. Scripts outline the bioinformatic pipeline using DADA2 and QIIME2 to create amplicon sequence variant tables from .fastq files.The .fastq files and sequence metadata are available on the Sequence Read Archive under project number: PRJNA1298480&rft.creator=Fickling, Nicole &rft.date=2025&rft.edition=1&rft_rights= https://creativecommons.org/licenses/by-nc/4.0/&rft_subject=Soil biology&rft_subject=bioinformatics&rft_subject=soil microbiota&rft_subject=soil&rft_subject=microbial community&rft_subject=bacteria&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Licence & Rights:

Other view details
Non-commercial Reuse Only (cc-by-nc)

https://creativecommons.org/licenses/by-nc/4.0/

Full description

Bioinformatic scripts for the paper titled "Habitat fragmentation shifts soil microbial composition but not richness". Scripts outline the bioinformatic pipeline using DADA2 and QIIME2 to create amplicon sequence variant tables from .fastq files.

The .fastq files and sequence metadata are available on the Sequence Read Archive under project number: PRJNA1298480

Issued: 08 08 2025

Created: 08 08 2025

Modified: 08 08 2025

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related People

Subjects
Soil biology | bacteria | bioinformatics | microbial community | soil | soil microbiota |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Identifiers