Data

Biodiversity and ecophysiology of Antarctic sea-ice bacteria

Australian Antarctic Division
Bowman, J. ; BOWMAN, JOHN
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=http://data.aad.gov.au/metadata/ASAC_1012&rft.title=Biodiversity and ecophysiology of Antarctic sea-ice bacteria&rft.identifier=http://data.aad.gov.au/metadata/ASAC_1012&rft.publisher=Australian Antarctic Data Centre&rft.description=The data set includes information relevant for the study and description of sea-ice bacteria contains the following dataset subgroups and is organised by REFERENCE number.1) Isolation data: strain designations (e.g. culture collection names are indicated for type cultures); media used for isolation and routine cultivation; temperature used for incubation; any special conditions (e.g. enrichment conditions) used for isolation; isolation site and type (e.g. sea-ice); availability of the indicated strain from the chief investigator (J. Bowman)2) Phenotypic data: Includes morphological, physiological and biochemical tests performed. Details on how these were performed are indicated in the relevant reference.3) Growth/temperature data: data for temperature related growth curves are given where available. Methods are indicated in the associated reference.4) Fatty acid/chemotaxonomy data: fatty acid and other related data are given where available. Methods are indicated in the associated reference.5) Genotypic data: data for DNA-guanosine/cytosine-content and genomic DNA:DNA hybridization are shown where available. Methods are indicated in the associated reference.6) Phylogenetic data: data for sequences are cross-referenced to the GenBank database. In some cases, aligned sequence datasets are available in FASTA format and can be viewed in the programs BIOEDIT (www.mbio.ncsu.edu/BioEdit/bioedit.html) or CLUSTAL W (www.ebi.ac.uk/clustalw).7) Other related published references which are useful or relevant to the dataset e.g. related sequences published subsequent to the ASAC studyProgress Code: completed&rft.creator=Bowman, J. &rft.creator=BOWMAN, JOHN &rft.date=2002&rft.coverage=westlimit=70; southlimit=-68; eastlimit=80; northlimit=-65&rft.coverage=westlimit=70; southlimit=-68; eastlimit=80; northlimit=-65&rft_rights=The data are available from the databases indicated in the summary.&rft_rights=Attribution 4.0 International (CC BY 4.0) https://creativecommons.org/licenses/by/4.0/legalcode&rft_rights=This data set conforms to the CCBY Attribution License (http://creativecommons.org/licenses/by/4.0/). Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=ASAC_1012 when using these data.&rft_rights=This metadata record is publicly available.&rft_subject=biota&rft_subject=oceans&rft_subject=EARTH SCIENCE > CRYOSPHERE > SEA ICE > PACK ICE&rft_subject=EARTH SCIENCE > CRYOSPHERE > SEA ICE > POLYNYAS&rft_subject=EARTH SCIENCE > CRYOSPHERE > SEA ICE&rft_subject=EARTH SCIENCE > OCEANS > SEA ICE > ICE TYPES&rft_subject=EARTH SCIENCE > OCEANS > SEA ICE > PACK ICE&rft_subject=EARTH SCIENCE > OCEANS > SEA ICE&rft_subject=EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > BACTERIA/ARCHAEA > CYANOBACTERIA (BLUE-GREEN ALGAE)&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON&rft_subject=EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > PIGMENTS > CHLOROPHYLL&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > PELAGIC&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > FRESHWATER ECOSYSTEMS > LAKE/POND&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > BIOMASS DYNAMICS&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > SECONDARY PRODUCTION&rft_subject=EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS > COMMUNITY STRUCTURE&rft_subject=16S RIBOSOMAL RNA GENE&rft_subject=ANTARCTICA&rft_subject=CELLULOPHAGA&rft_subject=FLAVOBACTERIUM&rft_subject=COLWELLIA&rft_subject=GLACIECOLA&rft_subject=GELIDIBACTER&rft_subject=HALOPHILIC BACTERIA&rft_subject=PHYLOGENY&rft_subject=POLYUNSATURATED FATTY ACIDS&rft_subject=PSEUDOALTEROMONAS&rft_subject=PSYCHROBACTER&rft_subject=PSYCHROFLEXUS&rft_subject=PSYCHROPHILIC BACTERIA&rft_subject=SEA ICE&rft_subject=PSYCHROSERPENS&rft_subject=SHEWANELLA&rft_subject=FLUORESCENCE MICROSCOPY&rft_subject=FSI > Filter Sampling Instrument&rft_subject=FLAME-IONIZATION DETECTOR&rft_subject=GAS CHROMATOGRAPHS&rft_subject=SPECTROPHOTOMETERS&rft_subject=TEMPERATURE PROFILERS&rft_subject=FLUOROMETERS&rft_subject=GC-MS > Gas Chromatograph/Mass Spectrometry&rft_subject=LABORATORY&rft_subject=AMD/AU&rft_subject=CEOS&rft_subject=AMD&rft_subject=CONTINENT > ANTARCTICA&rft_subject=CONTINENT > ANTARCTICA > Prydz Bay&rft_subject=CONTINENT > ANTARCTICA > Ellis Fjord&rft_subject=CONTINENT > ANTARCTICA > Long Fjord&rft_subject=CONTINENT > ANTARCTICA > Vestfold Hills&rft_subject=GEOGRAPHIC REGION > POLAR&rft_subject=VERTICAL LOCATION > SEA SURFACE&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Licence & Rights:

Open Licence view details
CC-BY

Attribution 4.0 International (CC BY 4.0)
https://creativecommons.org/licenses/by/4.0/legalcode

The data are available from the databases indicated in the summary.

This data set conforms to the CCBY Attribution License
(http://creativecommons.org/licenses/by/4.0/).

Please follow instructions listed in the citation reference provided at http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=ASAC_1012 when using these data.

This metadata record is publicly available.

Access:

Other

Full description

The data set includes information relevant for the study and description of sea-ice bacteria contains the following dataset subgroups and is organised by REFERENCE number.

1) Isolation data: strain designations (e.g. culture collection names are indicated for type cultures); media used for isolation and routine cultivation; temperature used for incubation; any special conditions (e.g. enrichment conditions) used for isolation; isolation site and type (e.g. sea-ice); availability of the indicated strain from the chief investigator (J. Bowman)

2) Phenotypic data: Includes morphological, physiological and biochemical tests performed. Details on how these were performed are indicated in the relevant reference.

3) Growth/temperature data: data for temperature related growth curves are given where available. Methods are indicated in the associated reference.

4) Fatty acid/chemotaxonomy data: fatty acid and other related data are given where available. Methods are indicated in the associated reference.

5) Genotypic data: data for DNA-guanosine/cytosine-content and genomic DNA:DNA hybridization are shown where available. Methods are indicated in the associated reference.

6) Phylogenetic data: data for sequences are cross-referenced to the GenBank database. In some cases, aligned sequence datasets are available in FASTA format and can be viewed in the programs BIOEDIT (www.mbio.ncsu.edu/BioEdit/bioedit.html) or CLUSTAL W (www.ebi.ac.uk/clustalw).

7) Other related published references which are useful or relevant to the dataset e.g. related sequences published subsequent to the ASAC study

Lineage

Progress Code: completed

Data time period: 1996-07-01 to 1999-06-30

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related People

80,-65 80,-68 70,-68 70,-65 80,-65

75,-66.5

text: westlimit=70; southlimit=-68; eastlimit=80; northlimit=-65

Subjects
16S RIBOSOMAL RNA GENE | AMD | AMD/AU | ANTARCTICA | CELLULOPHAGA | CEOS | COLWELLIA | CONTINENT > ANTARCTICA | CONTINENT > ANTARCTICA > Ellis Fjord | CONTINENT > ANTARCTICA > Long Fjord | CONTINENT > ANTARCTICA > Prydz Bay | CONTINENT > ANTARCTICA > Vestfold Hills | EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > BACTERIA/ARCHAEA > CYANOBACTERIA (BLUE-GREEN ALGAE) | EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > COMMUNITY DYNAMICS > COMMUNITY STRUCTURE | EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > BIOMASS DYNAMICS | EARTH SCIENCE > BIOSPHERE > ECOLOGICAL DYNAMICS > ECOSYSTEM FUNCTIONS > SECONDARY PRODUCTION | EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > AQUATIC ECOSYSTEMS > PLANKTON | EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > FRESHWATER ECOSYSTEMS > LAKE/POND | EARTH SCIENCE > BIOSPHERE > ECOSYSTEMS > MARINE ECOSYSTEMS > PELAGIC | EARTH SCIENCE > CRYOSPHERE > SEA ICE | EARTH SCIENCE > CRYOSPHERE > SEA ICE > PACK ICE | EARTH SCIENCE > CRYOSPHERE > SEA ICE > POLYNYAS | EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > PIGMENTS > CHLOROPHYLL | EARTH SCIENCE > OCEANS > SEA ICE | EARTH SCIENCE > OCEANS > SEA ICE > ICE TYPES | EARTH SCIENCE > OCEANS > SEA ICE > PACK ICE | FLAME-IONIZATION DETECTOR | FLAVOBACTERIUM | FLUORESCENCE MICROSCOPY | FLUOROMETERS | FSI > Filter Sampling Instrument | GAS CHROMATOGRAPHS | GC-MS > Gas Chromatograph/Mass Spectrometry | GELIDIBACTER | GEOGRAPHIC REGION > POLAR | GLACIECOLA | HALOPHILIC BACTERIA | LABORATORY | PHYLOGENY | POLYUNSATURATED FATTY ACIDS | PSEUDOALTEROMONAS | PSYCHROBACTER | PSYCHROFLEXUS | PSYCHROPHILIC BACTERIA | PSYCHROSERPENS | SEA ICE | SHEWANELLA | SPECTROPHOTOMETERS | TEMPERATURE PROFILERS | VERTICAL LOCATION > SEA SURFACE | biota | oceans |

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Other Information
Entrez Nucleotide Sequence Search - accession numbers required (GET DATA)

uri : http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=Nucleotide

Public information for ASAC project 1012 (PROJECT HOME PAGE)

uri : https://projects.aad.gov.au/search_projects_results.cfm?project_no=1012

BIOEDIT Program (VIEW RELATED INFORMATION)

uri : http://www.mbio.ncsu.edu/BioEdit/bioedit.html

CLUSTAL W Program (VIEW RELATED INFORMATION)

uri : http://www.ebi.ac.uk/clustalw

Citation reference for this metadata record and dataset (VIEW RELATED INFORMATION)

uri : http://data.aad.gov.au/aadc/metadata/citation.cfm?entry_id=ASAC_1012

Identifiers
  • global : ASAC_1012