Data

Bacterial genomics - Sphingobium yanoikuyae 'B2'

Commonwealth Scientific and Industrial Research Organisation
Unterweger, Birgit ; Bulach, Dieter ; Scoble, Judy ; Midgley, David ; Greenfield, Paul ; Lyras, Dena ; Johanesen, Priscilla ; Dumsday, Geoff
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.4225/08/578DB1D05A7D1&rft.title=Bacterial genomics - Sphingobium yanoikuyae 'B2'&rft.identifier=https://doi.org/10.4225/08/578DB1D05A7D1&rft.publisher=Commonwealth Scientific and Industrial Research Organisation&rft.description=Collection includes:*Sequencing reads*Sphingobium yanoikuyae strain_B2_R1_001.fastq.gzSphingobium yanoikuyae strain_B2_R2_001.fastq.gz*Velvet assembly as scaffolds or contigs*Sphingobium_yanoikuyae_strain_B2_scaffolds.zipSphingobium_yanoikuyae_strain_B2_contigs.zip*Annotation files - based on scaffolds*Annotation Sphingobium yanoikuyae strain B2.faaAnnotation Sphingobium yanoikuyae strain B2.gff*Putative cytochrome sequences*Sphingobium_yanoikuyae_strain_B2_putative_cytochrome_P450.zip*Putative plasmid sequence*Sphingobium yanoikuyae strain B2 putative plasmid.zip - file contains the fasta, gene calls and BLAST matches for this contigLineage: Data were produced from DNA extracted from the Sphingobium yanoikuyae B2 genome. DNA was sequenced using Illumina MiSeq technology.&rft.creator=Unterweger, Birgit &rft.creator=Bulach, Dieter &rft.creator=Scoble, Judy &rft.creator=Midgley, David &rft.creator=Greenfield, Paul &rft.creator=Lyras, Dena &rft.creator=Johanesen, Priscilla &rft.creator=Dumsday, Geoff &rft.date=2016&rft.edition=v4&rft_rights=CSIRO Data Licence https://research.csiro.au/dap/licences/csiro-data-licence/&rft_rights=Data is accessible online and may be reused in accordance with licence conditions&rft_rights=All Rights (including copyright) CSIRO 2016.&rft_subject=Sphingobium&rft_subject=yanoikuyae&rft_subject=Sphingobium yanoikuyae&rft_subject=bacteria&rft_subject=genomics&rft_subject=Industrial microbiology (incl. biofeedstocks)&rft_subject=Industrial biotechnology&rft_subject=BIOLOGICAL SCIENCES&rft_subject=Bacteriology&rft_subject=Microbiology&rft_subject=Microbial genetics&rft.type=dataset&rft.language=English Access the data
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Data is accessible online and may be reused in accordance with licence conditions

All Rights (including copyright) CSIRO 2016.

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Collection includes:

*Sequencing reads*
Sphingobium yanoikuyae strain_B2_R1_001.fastq.gz
Sphingobium yanoikuyae strain_B2_R2_001.fastq.gz

*Velvet assembly as scaffolds or contigs*
Sphingobium_yanoikuyae_strain_B2_scaffolds.zip
Sphingobium_yanoikuyae_strain_B2_contigs.zip

*Annotation files - based on scaffolds*
Annotation Sphingobium yanoikuyae strain B2.faa
Annotation Sphingobium yanoikuyae strain B2.gff

*Putative cytochrome sequences*
Sphingobium_yanoikuyae_strain_B2_putative_cytochrome_P450.zip

*Putative plasmid sequence*
Sphingobium yanoikuyae strain B2 putative plasmid.zip - file contains the fasta, gene calls and BLAST matches for this contig
Lineage: Data were produced from DNA extracted from the Sphingobium yanoikuyae B2 genome. DNA was sequenced using Illumina MiSeq technology.

Available: 2016-07-19

Data time period: 2014-01-01 to 2016-01-01

This dataset is part of a larger collection

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Subjects
Biological Sciences | Bacteriology | Industrial Biotechnology | Industrial Microbiology (Incl. Biofeedstocks) | Microbial Genetics | Microbiology | Sphingobium | Sphingobium yanoikuyae | bacteria | genomics | yanoikuyae |

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