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Additional file 3 of Gene editing and cardiac disease modelling for the interpretation of genetic variants of uncertain significance in congenital heart disease

The University of Western Australia
Fear, Vanessa S. ; Forbes, Catherine A. ; Shaw, Nicole C. ; Farley, Kathryn O. ; Mantegna, Jessica L. ; Htun, Jasmin P. ; Syn, Genevieve ; Viola, Helena ; Cserne Szappanos, Henrietta ; Hool, Livia ; Ward, Michelle ; Baynam, Gareth ; Lassmann, Timo
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ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.6084/m9.figshare.26649507.v1&rft.title=Additional file 3 of Gene editing and cardiac disease modelling for the interpretation of genetic variants of uncertain significance in congenital heart disease&rft.identifier=10.6084/m9.figshare.26649507.v1&rft.publisher=Figshare&rft.description=Additional file 3: Table S1A Wild type comparing cardiomyocytes to stem (GeneLevelDE_diff_WT_Cardio_Stem). Table S1B HDR comparing cardiomyocytes to stem (GeneLevelDE_diff_HDR_Cardio_Stem). Table S1C Difference during differentiation (GeneLevelDE_diff_HDR_WT_Cardio_Stem). Gene set enrichment results. Table S1D GO term significantly enriched in wild type and HDR differentiation (GOTermEnrichedDifferentiation). Table S1E DisGenNet terms enriched in differences in differentiation comparison (DisGenNetEnrichedWT_HDR). Table S1F Kegg pathways enriched in differences in differentiation comparison (KEGGenrichedDifffWt_HDR). DataS1G Geneset DB regulation in differences in differentiation comparison (GenesetDBreg-DiffWT_HDR). DataS1H Geneset Hallmark in differences in differentiation comparison (GenesetHallmark-DiffWT_HDR).&rft.creator=Fear, Vanessa S. &rft.creator=Forbes, Catherine A. &rft.creator=Shaw, Nicole C. &rft.creator=Farley, Kathryn O. &rft.creator=Mantegna, Jessica L. &rft.creator=Htun, Jasmin P. &rft.creator=Syn, Genevieve &rft.creator=Viola, Helena &rft.creator=Cserne Szappanos, Henrietta &rft.creator=Hool, Livia &rft.creator=Ward, Michelle &rft.creator=Baynam, Gareth &rft.creator=Lassmann, Timo &rft.date=2024&rft.relation=http://research-repository.uwa.edu.au/en/publications/cb0ba45b-a6a2-4a63-b1ae-bf5db76a7b98&rft_subject=FOS: Biological sciences&rft_subject=Genetics&rft.type=dataset&rft.language=English Access the data
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Additional file 3: Table S1A Wild type comparing cardiomyocytes to stem (GeneLevelDE_diff_WT_Cardio_Stem). Table S1B HDR comparing cardiomyocytes to stem (GeneLevelDE_diff_HDR_Cardio_Stem). Table S1C Difference during differentiation (GeneLevelDE_diff_HDR_WT_Cardio_Stem). Gene set enrichment results. Table S1D GO term significantly enriched in wild type and HDR differentiation (GOTermEnrichedDifferentiation). Table S1E DisGenNet terms enriched in differences in differentiation comparison (DisGenNetEnrichedWT_HDR). Table S1F Kegg pathways enriched in differences in differentiation comparison (KEGGenrichedDifffWt_HDR). DataS1G Geneset DB regulation in differences in differentiation comparison (GenesetDBreg-DiffWT_HDR). DataS1H Geneset Hallmark in differences in differentiation comparison (GenesetHallmark-DiffWT_HDR).

Notes

External Organisations
Perth Children’s Hospital; Victor Chang Cardiac Research Institute; Genetic Services of Western Australia
Associated Persons
Catherine A. Forbes (Creator); Kathryn O. Farley (Creator); Jessica L. Mantegna (Creator)Jasmin P. Htun (Creator); Genevieve Syn (Creator); Michelle Ward (Creator)

Issued: 2024-08-14

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FOS: Biological sciences | Genetics |

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