Software

Greenfield Hybrid Analysis Pipeline (GHAP)

Commonwealth Scientific and Industrial Research Organisation
Greenfield, Paul
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CSIRO Binary Software Licence Agreement v1.0
https://wiki.csiro.au/display/dmsdoc/CSIRO+Binary+Software+Licence+Agreement

All Rights (including copyright) CSIRO 2017.

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Data is accessible online and may be reused in accordance with licence conditions

Brief description

An in-house amplicon clustering and classification pipeline built around tools from USEARCH and RDP. It handles both 16S and 18S rDNA sequence data, and can be customised to use other reference sets and marker genes.
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