Data

Development of the coral index, a summary of coral reef resilience as a guide for management

Australian Institute of Marine Science
Australian Institute of Marine Science (AIMS)
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
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Journal of Environmental Management (in press).\n \n The dataset includes a series of .csv files: \n all.reef.csv: Benthic cover data and density of juvenile hard corals (Maintenance and Update Frequency: notPlannedStatement: Data lineage can be found via the metadata records and technical information available for the individual data sets:\n AIMS Long-term Monitoring Program : https://doi.org/10.25845/5c09bc4ff315c\n Marine Monitoring Program: https://doi.org/10.25845/5cc64f29b35a1\n AIMS temperature logger program: https://doi.org/10.25845/5b4eb0f9bb848\n Queensland Government Water Monitoring Information Portal: https://water-monitoring.information.qld.gov.au/. River discharge data were sourced from the Queensland Government Water Monitoring Information Portal. Use of these data is predicated on the Copyright Notice available at: https://water-monitoring.information.qld.gov.au/wini/documents/WMIP_UG_2019.pdf and include as River Discharge copyright statement.pdf in the files associated with this record.\n Bureau of Meteorology eReefs Marine Water Quality catalogue: http://ereeftds.bom.gov.au/ereefs/tds/catalog/ereef/mwq/catalog.html Water Quality data were sourced from the Bureau of Meteorology (BoM), Australia. Use of these data is predicated on the Copyright Notice available at http://www.bom.gov.au/other/copyright.shtml\n Thompson et al. (2014) Marine Monitoring Program: Annual report of AIMS activities 2013-2014. Inshore water quality and coral reef monitoring. 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While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.&rft_rights=Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: Australian Institute of Marine Science (AIMS). (2020). Development of the coral index, a summary of coral reef resilience as a guide for management, https://doi.org/10.25845/g0nc-1549, accessed[date-of-access].&rft_rights=Creative Commons Attribution-NonCommercial 3.0 Australia License http://creativecommons.org/licenses/by-nc/3.0&rft_subject=oceans&rft.type=dataset&rft.language=English Access the data

Licence & Rights:

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Creative Commons Attribution-NonCommercial 3.0 Australia License
http://creativecommons.org/licenses/by-nc/3.0

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WWW:LINK-1.0-http--related

License Graphic

Creative Commons Attribution-NonCommercial 3.0 Australia License

http://creativecommons.org/international/au/

WWW:LINK-1.0-http--related

WWW:LINK-1.0-http--related

License Text

Use Limitation: All AIMS data, products and services are provided "as is" and AIMS does not warrant their fitness for a particular purpose or non-infringement. While AIMS has made every reasonable effort to ensure high quality of the data, products and services, to the extent permitted by law the data, products and services are provided without any warranties of any kind, either expressed or implied, including without limitation any implied warranties of title, merchantability, and fitness for a particular purpose or non-infringement. AIMS make no representation or warranty that the data, products and services are accurate, complete, reliable or current. To the extent permitted by law, AIMS exclude all liability to any person arising directly or indirectly from the use of the data, products and services.

Attribution: Format for citation of metadata sourced from Australian Institute of Marine Science (AIMS) in a list of reference is as follows: "Australian Institute of Marine Science (AIMS). (2020). Development of the coral index, a summary of coral reef resilience as a guide for management, https://doi.org/10.25845/g0nc-1549, accessed[date-of-access]".

Access:

Other

Contact Information

reception@aims.gov.au
adc@aims.gov.au

Brief description

This dataset provides all data utilised by the R code stored at the GitHub Repository 'Coral Index' (link below) that provides analysis and production of figures for the manuscript Thompson A, Martin K, Logan M (2020) Development of the coral index, a summary of coral reef resilience as a guide for management. Journal of Environmental Management (in press).\n \n The dataset includes a series of .csv files: \n all.reef.csv: Benthic cover data and density of juvenile hard corals (<5 cm) extracted from the AIMS Long-term Monitoring Program and Marine Monitoring Program database. \n \n discharge.annual.csv: River discharge data for rivers adjacent to the surveyed reefs sourced from the Queensland Government Water Monitoring Information Portal \n \n bom.month.csv: Monthly mean estimates of water quality parameters derived from satellite observations download from the Bureau of Meteorology eReefs Marine Water Quality Dashboard \n \n waterTemp.csv: Seawater temperature logger data from coral reef sites extracted from the AIMS Temperature logger database \n \n genus_wq_scores.csv: a parameter developed by Thompson et al. 2014 based on the distribution of coral genera along a water quality gradient used for scoring the community composition indicator \n \n gomp.acr.2.csv, gomp.acr.5.csv, gomp.oth.2.csv, gomp.oth.5.csv: distribution of predictions for annual rate of increase in cover of Acroporidae (acr) or other hard corals (oth) at 2 m and 5 m depths derived from gompertz growth equation models used for scoring the cover change indicator \n \n MA.limits.csv: Reef level thresholds developed for scoring the macroalgae indicator \n \n names.lookup.csv and temperature.lookup.csv: files that enable linking of data where unique locational identifiers differ among sources. \n \n In combination these data are used to demonstrate use of an multi indicator index of reef resilience, to quantify the impacts of acute and chronic pressures on inshore coral reefs. These data represent a timepoint capture of ongoing monitoring programs.\n

Lineage

Maintenance and Update Frequency: notPlanned
Statement: Data lineage can be found via the metadata records and technical information available for the individual data sets:\n AIMS Long-term Monitoring Program : https://doi.org/10.25845/5c09bc4ff315c\n Marine Monitoring Program: https://doi.org/10.25845/5cc64f29b35a1\n AIMS temperature logger program: https://doi.org/10.25845/5b4eb0f9bb848\n Queensland Government Water Monitoring Information Portal: https://water-monitoring.information.qld.gov.au/. River discharge data were sourced from the Queensland Government Water Monitoring Information Portal. Use of these data is predicated on the Copyright Notice available at: https://water-monitoring.information.qld.gov.au/wini/documents/WMIP_UG_2019.pdf and include as River Discharge copyright statement.pdf in the files associated with this record.\n Bureau of Meteorology eReefs Marine Water Quality catalogue: http://ereeftds.bom.gov.au/ereefs/tds/catalog/ereef/mwq/catalog.html Water Quality data were sourced from the Bureau of Meteorology (BoM), Australia. Use of these data is predicated on the Copyright Notice available at http://www.bom.gov.au/other/copyright.shtml\n Thompson et al. (2014) Marine Monitoring Program: Annual report of AIMS activities 2013-2014. Inshore water quality and coral reef monitoring. Australian Institute of Marine Science Report to the Great Barrier Reef Marine Park Authority.: http://hdl.handle.net/11017/2975\n

Notes

Credit
Queensland Government Water Monitoring Information Portal
Credit
Bureau of Meteorology (BoM), Australia.
Credit
Thompson A. Australian Institute of Marine Science (AIMS)
Credit
Logan, M. (AIMS)
Credit
Martin, K. Great Barrier Reef Marine Park Authority (GBRMPA), Australia
Credit
AIMS Sea Water Temperature Observing System (AIMS Temperature Logger Program)
Credit
Reef Plan Monitoring Of Inshore Coral Reef Communities, Great Barrier Reef (RRMMP)
Credit
AIMS Long-Term Monitoring Program: Video And Photo Transects (Great Barrier Reef)

Modified: 19 01 2023

This dataset is part of a larger collection

Click to explore relationships graph

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Subjects
oceans |

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Other Information
Thompson A, Martin K, Logan M. (2020) Development of the coral index, a summary of coral reef resilience as a guide for management. Journal of Environmental Management 271:111038

uri : http://epubs.aims.gov.au/handle/11068/16342

Data Download - Coral Index for Reef Resilience [15 csv files + 1 pdf + 1 word doc] 2.47 MB

uri : https://api.aims.gov.au/data-v2.0/7c6101f9-50a6-46fb-afe9-c16bd09334d0/files/Coral-Index-Reef-Resilience_AIMS_20200522.zip

Thompson A, Lønborg C, Logan M, Costello P, Davidson J, Furnas M, Gunn K, Liddy M, Skuza M, Uthicke S, Wright M, Zagorskis I, and Schaffelke B (2014) Marine Monitoring Program. Annual Report of AIMS Activities 2013 to 2014– Inshore water quality and coral reef monitoring. Report for the Great Barrier Reef Marine Park Authority. Australian Institute of Marine Science, Townsville.160 pp.

handle : http://hdl.handle.net/11017/2975

Reef Plan Monitoring Of Inshore Coral Reef Communities, Great Barrier Reef (RRMMP)

doi : https://doi.org/10.25845/5cc64f29b35a1

AIMS Sea Water Temperature Observing System (AIMS Temperature Logger Program)

doi : https://doi.org/10.25845/5b4eb0f9bb848

Bureau of Meteorology eReefs Marine Water Quality catalogue

uri : http://ereeftds.bom.gov.au/ereefs/tds/catalog/ereef/mwq/catalog.html

Queensland Government Water Monitoring Information Portal

uri : https://water-monitoring.information.qld.gov.au/

AIMS Long-Term Monitoring Program: Video And Photo Transects (Great Barrier Reef)

doi : https://doi.org/10.25845/5c09bc4ff315c

GitHub Repository Coral Index https://github.com/AIMS/coral_index.git

uri : https://github.com/AIMS/coral_index.git

Identifiers
  • global : 7c6101f9-50a6-46fb-afe9-c16bd09334d0