Brief description
This dataset provides all data utilised by the R code stored at the GitHub Repository 'Coral Index' (link below) that provides analysis and production of figures for the manuscript Thompson A, Martin K, Logan M (2020) Development of the coral index, a summary of coral reef resilience as a guide for management. Journal of Environmental Management (in press). The dataset includes a series of .csv files: all.reef.csv: Benthic cover data and density of juvenile hard corals (<5 cm) extracted from the AIMS Long-term Monitoring Program and Marine Monitoring Program database. discharge.annual.csv: River discharge data for rivers adjacent to the surveyed reefs sourced from the Queensland Government Water Monitoring Information Portal bom.month.csv: Monthly mean estimates of water quality parameters derived from satellite observations download from the Bureau of Meteorology eReefs Marine Water Quality Dashboard waterTemp.csv: Seawater temperature logger data from coral reef sites extracted from the AIMS Temperature logger database genus_wq_scores.csv: a parameter developed by Thompson et al. 2014 based on the distribution of coral genera along a water quality gradient used for scoring the community composition indicator gomp.acr.2.csv, gomp.acr.5.csv, gomp.oth.2.csv, gomp.oth.5.csv: distribution of predictions for annual rate of increase in cover of Acroporidae (acr) or other hard corals (oth) at 2 m and 5 m depths derived from gompertz growth equation models used for scoring the cover change indicator MA.limits.csv: Reef level thresholds developed for scoring the macroalgae indicator names.lookup.csv and temperature.lookup.csv: files that enable linking of data where unique locational identifiers differ among sources. In combination these data are used to demonstrate use of an multi indicator index of reef resilience, to quantify the impacts of acute and chronic pressures on inshore coral reefs. These data represent a timepoint capture of ongoing monitoring programs.Lineage
Maintenance and Update Frequency: notPlannedAIMS Long-term Monitoring Program : https://doi.org/10.25845/5c09bc4ff315c
Marine Monitoring Program: https://doi.org/10.25845/5cc64f29b35a1
AIMS temperature logger program: https://doi.org/10.25845/5b4eb0f9bb848
Queensland Government Water Monitoring Information Portal: https://water-monitoring.information.qld.gov.au/. River discharge data were sourced from the Queensland Government Water Monitoring Information Portal. Use of these data is predicated on the Copyright Notice available at: https://water-monitoring.information.qld.gov.au/wini/documents/WMIP_UG_2019.pdf and include as River Discharge copyright statement.pdf in the files associated with this record.
Bureau of Meteorology eReefs Marine Water Quality catalogue: http://ereeftds.bom.gov.au/ereefs/tds/catalog/ereef/mwq/catalog.html Water Quality data were sourced from the Bureau of Meteorology (BoM), Australia. Use of these data is predicated on the Copyright Notice available at http://www.bom.gov.au/other/copyright.shtml
Thompson et al. (2014) Marine Monitoring Program: Annual report of AIMS activities 2013-2014. Inshore water quality and coral reef monitoring. Australian Institute of Marine Science Report to the Great Barrier Reef Marine Park Authority.: http://hdl.handle.net/11017/2975
Notes
CreditQueensland Government Water Monitoring Information Portal
Bureau of Meteorology (BoM), Australia.
Thompson A. Australian Institute of Marine Science (AIMS)
Logan, M. (AIMS)
Martin, K. Great Barrier Reef Marine Park Authority (GBRMPA), Australia
AIMS Sea Water Temperature Observing System (AIMS Temperature Logger Program)
Reef Plan Monitoring Of Inshore Coral Reef Communities, Great Barrier Reef (RRMMP)
AIMS Long-Term Monitoring Program: Video And Photo Transects (Great Barrier Reef)
Modified: 13 03 2024
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Thompson A, Martin K, Logan M. (2020) Development of the coral index, a summary of coral reef resilience as a guide for management. Journal of Environmental Management 271:111038
local : 11068/16342
Data Download - Coral Index for Reef Resilience [15 csv files + 1 pdf + 1 word doc] 2.47 MB
Thompson A, Lønborg C, Logan M, Costello P, Davidson J, Furnas M, Gunn K, Liddy M, Skuza M, Uthicke S, Wright M, Zagorskis I, and Schaffelke B (2014) Marine Monitoring Program. Annual Report of AIMS Activities 2013 to 2014– Inshore water quality and coral reef monitoring. Report for the Great Barrier Reef Marine Park Authority. Australian Institute of Marine Science, Townsville.160 pp.
handle :
http://hdl.handle.net/11017/2975
Reef Plan Monitoring Of Inshore Coral Reef Communities, Great Barrier Reef (RRMMP)
doi :
https://doi.org/10.25845/5cc64f29b35a1
AIMS Sea Water Temperature Observing System (AIMS Temperature Logger Program)
doi :
https://doi.org/10.25845/5b4eb0f9bb848
Bureau of Meteorology eReefs Marine Water Quality catalogue
uri :
http://ereeftds.bom.gov.au/ereefs/tds/catalog/ereef/mwq/catalog.html
Queensland Government Water Monitoring Information Portal
uri :
https://water-monitoring.information.qld.gov.au/
AIMS Long-Term Monitoring Program: Video And Photo Transects (Great Barrier Reef)
doi :
https://doi.org/10.25845/5c09bc4ff315c
GitHub Repository Coral Index https://github.com/AIMS/coral_index.git
- global : 7c6101f9-50a6-46fb-afe9-c16bd09334d0