Data

Clover v3 assembly

The University of Western Australia
Dudchenko, Olga ; Pham, Melanie ; Lui, Christopher ; Bayer, Philipp Emanuel ; Erskine, William ; Aiden, Erez Lieberman ; Kaur, Parwinder
Viewed: [[ro.stat.viewed]] Cited: [[ro.stat.cited]] Accessed: [[ro.stat.accessed]]
ctx_ver=Z39.88-2004&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Adc&rfr_id=info%3Asid%2FANDS&rft_id=info:doi10.5281/zenodo.1095215&rft.title=Clover v3 assembly&rft.identifier=10.5281/zenodo.1095215 &rft.publisher=Zenodo&rft.description=We present an assembly of the genome of subterranean clover, Trifolium subterraneum, an important pasture legume. Specifically, in situ Hi-C data (48X) was used to correct misjoins and anchor, order, and orient scaffolds in a previously published genome assembly (TSUd_r1.1; scaffold N50: 287kb). This resulted in an improved genome assembly (TrSub3; scaffold N50: 56Mb) containing eight chromosome-length scaffolds that span 95% of the sequenced bases in the input assembly.&rft.creator=Dudchenko, Olga &rft.creator=Pham, Melanie &rft.creator=Lui, Christopher &rft.creator=Bayer, Philipp Emanuel &rft.creator=Erskine, William &rft.creator=Aiden, Erez Lieberman &rft.creator=Kaur, Parwinder &rft.date=2017&rft.type=dataset&rft.language=English Access the data
Cite Saved to MyRDA Save to MyRDA

Access:

Open

Full description

We present an assembly of the genome of subterranean clover, Trifolium subterraneum, an important pasture legume. Specifically, in situ Hi-C data (48X) was used to correct misjoins and anchor, order, and orient scaffolds in a previously published genome assembly (TSUd_r1.1; scaffold N50: 287kb). This resulted in an improved genome assembly (TrSub3; scaffold N50: 56Mb) containing eight chromosome-length scaffolds that span 95% of the sequenced bases in the input assembly.

Notes

External Organisations
Rice University; Baylor College of Medicine; The University of Western Australia
Associated Persons
Olga Dudchenko (Creator); Melanie Pham (Creator); Christopher Lui (Creator)

Issued: 2017-12-07

This dataset is part of a larger collection

Click to explore relationships graph
Help

Related Organisations

Related People

Related Websites

User Contributed Tags    

Login to tag this record with meaningful keywords to make it easier to discover

Identifiers
Similar data you may be interested in: